Changes between Version 38 and Version 39 of Jupyter

Timestamp:

05/21/18 22:11:40 (6 years ago)

Author:

Jens Henrik Goebbert

Comment:

--

Jupyter

@@ -91 +91 @@
 with a basic Jupyter kernel (e.g. in ${HOME}/.local/share/jupyter/kernels/**mykernel**)
 
-* LOAD modules
+1. LOAD the modules you need and ensure Python3 is included!
 {{{ #!ShellExample
 module --force purge
@@ -99 +99 @@
 }}}
 
-* CREATE Python virtual environment in $HOME/venv_mykernel
+2. CREATE Python virtual environment in $HOME/venv_mykernel
 {{{ #!ShellExample
 cd $HOME
@@ -106 +106 @@
   more: https://docs.python.org/3/library/venv.html
 
-* ACTIVATE new Python virtual environment
+3. ACTIVATE new Python virtual environment
 {{{ #!ShellExample
 source ${HOME}/venv_mykernel/bin/activate
@@ -112 +112 @@
 }}}
 
-* CREATE your personal Jupyter kernel
+4. CREATE your personal Jupyter kernel
 {{{ #!ShellExample
 (venv) $ pip install ipykernel
 (venv) $ python3 -m ipython kernel install --user --name=mykernel
+(venv) $ <install whatever else you need in your Python virtual environment using pip>
 }}}
   This installs your personal Jupyter kernel in ${HOME}/.local/share/jupyter/kernels/mykernel \\more: http://ipython.readthedocs.io/en/stable/install/kernel_install.html
@@ -121 +122 @@
 Now, modify this basic jupyter kernel to suite your needs.
 
-* WRITE A SCRIPT (${HOME}/venv_mykernel/mykernel.sh) that does your setup followed by the IPython kernel launch:
+5. WRITE A SCRIPT (${HOME}/venv_mykernel/mykernel.sh) that does your setup followed by the IPython kernel launch:
+  a. load the same modules as in (1)
+  b. load the Python virtual environment as in (2)
 {{{ #!ShellExample
 #!/usr/bin/env bash
@@ -136 +139 @@
 }}}
 
-* MODIFY the ${HOME}/.local/share/jupyter/kernels/mykernel/kernel.json file to call your script:
+6. MODIFY the ${HOME}/.local/share/jupyter/kernels/mykernel/kernel.json file to call your script: 
 {{{ #!ShellExample
  "argv": [